BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B03LP1|AL429164
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1711 0.0
>3x_Contig1706
Length = 16303
Score = 1711 bits (862), Expect = 0.0
Identities = 866/868 (99%)
Strand = Plus / Minus
Query: 14 gatcatcaattgttcgagaatgactgttagcatgcatgtcgatatttaccaatagatact 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7665 gatcatcaattgttcgagaatgactgttagcatgcatgtcgatatttaccaatagatact 7606
Query: 74 ccgctcttgcgtacataataacgtaacgaacatacgtttttaagaaacagtgtggggtac 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7605 ccgctcttgcgtacataataacgtaacgaacatacgtttttaagaaacagtgtggggtac 7546
Query: 134 cagacttgcaagtgcctctagcaactgggaatagtttgtacaatgcatggctctcacagt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7545 cagacttgcaagtgcctctagcaactgggaatagtttgtacaatgcatggctctcacagt 7486
Query: 194 accttgacttttcttaggtccgatacttttgttttatgttgtgtagagtttattacctct 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7485 accttgacttttcttaggtccgatacttttgttttatgttgtgtagagtttattacctct 7426
Query: 254 tttctactaaatgtttaaatcctaatttaacttgtgagatagcttaaggcttccacacga 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7425 tttctactaaatgtttaaatcctaatttaacttgtgagatagcttaaggcttccacacga 7366
Query: 314 tatcatgaattagagagattagaacagaatatacagttgcggtagcactagacattgcaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7365 tatcatgaattagagagattagaacagaatatacagttgcggtagcactagacattgcaa 7306
Query: 374 gattttagggtttgatatcttggggcaactaaatttgtttcccagcattcctgattattg 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 gattttagggtttgatatcttggggcaactaaatttgtttcccagcattcctgattattg 7246
Query: 434 atggtggttgagaataacattgcagagttggcgaatttaacgctagatcatcgaatggat 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7245 atggtggttgagaataacattgcagagttggcgaatttaacgctagatcatcgaatggat 7186
Query: 494 cctaaaaacgaagcccagtttatagacatcacagatcatttaaaggccctagcagcgaag 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 cctaaaaacgaagcccagtttatagacatcacagatcatttaaaggccctagcagcgaag 7126
Query: 554 ttggcaccagagacagtggtcaaagaagctacgttcaatctgttcgaagggacttatgca 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7125 ttggcaccagagacagtggtcaaagaagctacgttcaatctgttcgaagggacttatgca 7066
Query: 614 ttggaagtatgccacgtgaaattagatacaagccttattgagttatgccctgaagagttg 673
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7065 ttggaagtatgcaacgtgaaattagatacaagccttattgagttatgccctgaagagttg 7006
Query: 674 gaattcgactgchatgtaccatacggggactcaaataatggagaaaggcttgattatgtc 733
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7005 gaattcgactgcaatgtaccatacggggactcaaataatggagaaaggcttgattatgtc 6946
Query: 734 actgcggtttgtgatcgattatgtcgctctttgatgaattggcttcatgattaccaaact 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6945 actgcggtttgtgatcgattatgtcgctctttgatgaattggcttcatgattaccaaact 6886
Query: 794 ctacccactacggtgctaagttgtcgatacgtcgaatttcttatggaattatacacttcg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6885 ctacccactacggtgctaagttgtcgatacgtcgaatttcttatggaattatacacttcg 6826
Query: 854 aacccggtttcatcgttacaatcgttcc 881
||||||||||||||||||||||||||||
Sbjct: 6825 aacccggtttcatcgttacaatcgttcc 6798
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5342
Number of Sequences: 1807
Number of extensions: 5342
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)